Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 AL137784.2-201ENST00000607332 1000 ntBASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 AC004264.1-201ENST00000608354 794 ntBASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 AC063926.3-201ENST00000624734 5658 ntBASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD3Q9NX63 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CHCHD3Q9NX63 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 AC060766.5-201ENST00000590539 871 ntBASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 KRT8P3-201ENST00000519669 1449 ntBASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHCHD3Q9NX63 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 KRT8P41-201ENST00000533985 1514 ntBASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 AC097658.1-201ENST00000475555 843 ntBASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 C1QL1P1-201ENST00000568105 661 ntBASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 AC008687.6-201ENST00000596318 630 ntBASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 AC092666.2-201ENST00000613287 246 ntBASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD3Q9NX63 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms