Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 KRT16P4-201ENST00000453883 522 ntBASIC16.51■□□□□ 0.23
HPF1Q9NWY4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 AC112698.1-201ENST00000510299 916 ntBASIC16.51■□□□□ 0.23
HPF1Q9NWY4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 RN7SL510P-201ENST00000581311 263 ntBASIC16.51■□□□□ 0.23
HPF1Q9NWY4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 AC093010.1-201ENST00000473625 1624 ntBASIC16.51■□□□□ 0.23
HPF1Q9NWY4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 AC012313.1-201ENST00000593393 3059 ntBASIC16.51■□□□□ 0.23
HPF1Q9NWY4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HPF1Q9NWY4 AL139384.1-201ENST00000612143 3047 ntBASIC16.51■□□□□ 0.23
HPF1Q9NWY4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 FER1L4-210ENST00000615531 5998 ntBASIC16.5■□□□□ 0.23
HPF1Q9NWY4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPF1Q9NWY4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 AC022898.2-201ENST00000616822 1312 ntBASIC16.49■□□□□ 0.23
HPF1Q9NWY4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 UNC93B7-201ENST00000509439 705 ntBASIC16.49■□□□□ 0.23
HPF1Q9NWY4 AC009533.2-201ENST00000543664 586 ntBASIC16.49■□□□□ 0.23
HPF1Q9NWY4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.49■□□□□ 0.23
HPF1Q9NWY4 AC005336.2-201ENST00000593183 939 ntBASIC16.49■□□□□ 0.23
HPF1Q9NWY4 BNIP3P18-201ENST00000593976 575 ntBASIC16.49■□□□□ 0.23
HPF1Q9NWY4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms