Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 AF186996.4-201ENST00000467186 377 ntBASIC18.36■□□□□ 0.53
VPS45Q9NRW7 RNPS1P1-201ENST00000507437 918 ntBASIC18.36■□□□□ 0.53
VPS45Q9NRW7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.36■□□□□ 0.53
VPS45Q9NRW7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 PMS2P7-201ENST00000506558 1336 ntBASIC18.35■□□□□ 0.53
VPS45Q9NRW7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 KRT18P67-201ENST00000432816 1264 ntBASIC18.35■□□□□ 0.53
VPS45Q9NRW7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VPS45Q9NRW7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 NOC2LP2-201ENST00000407594 1944 ntBASIC18.34■□□□□ 0.53
VPS45Q9NRW7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 IGHGP-201ENST00000390555 1178 ntBASIC18.34■□□□□ 0.53
VPS45Q9NRW7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 POM121L3P-201ENST00000419331 1163 ntBASIC18.34■□□□□ 0.53
VPS45Q9NRW7 MINOS1P3-201ENST00000457048 203 ntBASIC18.34■□□□□ 0.53
VPS45Q9NRW7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 AC106730.1-201ENST00000566722 1090 ntBASIC18.34■□□□□ 0.53
VPS45Q9NRW7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 AC132938.6-201ENST00000623828 1655 ntBASIC18.34■□□□□ 0.53
VPS45Q9NRW7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VPS45Q9NRW7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms