Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 AL049757.1-201ENST00000616842 1596 ntBASIC20.2■□□□□ 0.82
A1CFQ9NQ94 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
A1CFQ9NQ94 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 BX842568.4-201ENST00000421222 227 ntBASIC20.19■□□□□ 0.82
A1CFQ9NQ94 MED15P5-201ENST00000423150 992 ntBASIC20.19■□□□□ 0.82
A1CFQ9NQ94 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 AL356488.2-201ENST00000602755 427 ntBASIC20.19■□□□□ 0.82
A1CFQ9NQ94 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
A1CFQ9NQ94 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 AC132938.5-201ENST00000624980 1813 ntBASIC20.18■□□□□ 0.82
A1CFQ9NQ94 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A1CFQ9NQ94 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 AC007613.1-201ENST00000572811 2597 ntBASIC20.17■□□□□ 0.82
A1CFQ9NQ94 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 AC073621.1-201ENST00000392730 636 ntBASIC20.17■□□□□ 0.82
A1CFQ9NQ94 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.17■□□□□ 0.82
A1CFQ9NQ94 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
A1CFQ9NQ94 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms