Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 AIRN-201ENST00000601203 4374 ntBASIC19.05■□□□□ 0.64
SIX2Q9NPC8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 COX5BP2-201ENST00000392354 334 ntBASIC19.05■□□□□ 0.64
SIX2Q9NPC8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX2Q9NPC8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 AC005332.1-201ENST00000577698 1310 ntBASIC19.04■□□□□ 0.64
SIX2Q9NPC8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 AC007967.3-201ENST00000434308 558 ntBASIC19.04■□□□□ 0.64
SIX2Q9NPC8 AC125634.1-201ENST00000438758 1403 ntBASIC19.04■□□□□ 0.64
SIX2Q9NPC8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GUSBP12-201ENST00000513727 720 ntBASIC19.04■□□□□ 0.64
SIX2Q9NPC8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 AC124864.1-201ENST00000623408 392 ntBASIC19.04■□□□□ 0.64
SIX2Q9NPC8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX2Q9NPC8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 FAM86EP-206ENST00000510506 987 ntBASIC19.03■□□□□ 0.64
SIX2Q9NPC8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.03■□□□□ 0.64
SIX2Q9NPC8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms