Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTA1Q9NP79 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTA1Q9NP79 AC135776.1-201ENST00000319817 2481 ntBASIC19.81■□□□□ 0.76
VTA1Q9NP79 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.81■□□□□ 0.76
VTA1Q9NP79 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTA1Q9NP79 AC009949.1-201ENST00000623048 1830 ntBASIC19.81■□□□□ 0.76
VTA1Q9NP79 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTA1Q9NP79 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTA1Q9NP79 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTA1Q9NP79 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTA1Q9NP79 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTA1Q9NP79 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTA1Q9NP79 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTA1Q9NP79 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.8■□□□□ 0.76
VTA1Q9NP79 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTA1Q9NP79 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 AP000974.1-201ENST00000623909 2387 ntBASIC19.79■□□□□ 0.76
VTA1Q9NP79 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 MCCD1P2-201ENST00000423228 335 ntBASIC19.79■□□□□ 0.76
VTA1Q9NP79 PRSS29P-201ENST00000440800 595 ntBASIC19.79■□□□□ 0.76
VTA1Q9NP79 VN2R19P-201ENST00000442399 1052 ntBASIC19.79■□□□□ 0.76
VTA1Q9NP79 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.79■□□□□ 0.76
VTA1Q9NP79 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.79■□□□□ 0.76
VTA1Q9NP79 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTA1Q9NP79 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 AC002558.1-201ENST00000488906 803 ntBASIC19.78■□□□□ 0.76
VTA1Q9NP79 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 MIR4751-201ENST00000578027 74 ntBASIC19.78■□□□□ 0.76
VTA1Q9NP79 AL805961.1-202ENST00000641562 540 ntBASIC19.78■□□□□ 0.76
VTA1Q9NP79 AC134684.3-201ENST00000641758 218 ntBASIC19.78■□□□□ 0.76
VTA1Q9NP79 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
VTA1Q9NP79 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 AC002310.6-201ENST00000624451 1377 ntBASIC19.78■□□□□ 0.76
VTA1Q9NP79 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTA1Q9NP79 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.77■□□□□ 0.76
VTA1Q9NP79 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTA1Q9NP79 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTA1Q9NP79 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTA1Q9NP79 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTA1Q9NP79 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms