Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SSU72Q9NP77 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
SSU72Q9NP77 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SSU72Q9NP77 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSU72Q9NP77 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSU72Q9NP77 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 BX276092.7-203ENST00000637198 1536 ntBASIC17.64■□□□□ 0.41
SSU72Q9NP77 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 AC090192.1-201ENST00000517740 490 ntBASIC17.64■□□□□ 0.41
SSU72Q9NP77 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 AL359736.2-201ENST00000621992 437 ntBASIC17.64■□□□□ 0.41
SSU72Q9NP77 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 DOC2GP-204ENST00000639052 2548 ntBASIC17.64■□□□□ 0.41
SSU72Q9NP77 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSU72Q9NP77 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SSU72Q9NP77 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 PVRIG2P-201ENST00000435460 978 ntBASIC17.63■□□□□ 0.41
SSU72Q9NP77 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 LINC02012-201ENST00000608206 1725 ntBASIC17.63■□□□□ 0.41
SSU72Q9NP77 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSU72Q9NP77 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SSU72Q9NP77 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 FAM197Y4-202ENST00000622692 608 ntBASIC17.62■□□□□ 0.41
SSU72Q9NP77 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 AC046185.3-201ENST00000623228 1824 ntBASIC17.62■□□□□ 0.41
SSU72Q9NP77 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSU72Q9NP77 AC005915.1-201ENST00000624912 2018 ntBASIC17.62■□□□□ 0.41
SSU72Q9NP77 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms