Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.24■□□□□ 0.51
SP110Q9HB58 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.24■□□□□ 0.51
SP110Q9HB58 AL845331.1-201ENST00000424978 1190 ntBASIC18.24■□□□□ 0.51
SP110Q9HB58 AC246785.2-201ENST00000432512 513 ntBASIC18.24■□□□□ 0.51
SP110Q9HB58 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.24■□□□□ 0.51
SP110Q9HB58 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SP110Q9HB58 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.24■□□□□ 0.51
SP110Q9HB58 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.24■□□□□ 0.51
SP110Q9HB58 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.24■□□□□ 0.51
SP110Q9HB58 Z69720.1-201ENST00000601483 472 ntBASIC18.24■□□□□ 0.51
SP110Q9HB58 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.24■□□□□ 0.51
SP110Q9HB58 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.24■□□□□ 0.51
SP110Q9HB58 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SP110Q9HB58 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.23■□□□□ 0.51
SP110Q9HB58 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.23■□□□□ 0.51
SP110Q9HB58 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.23■□□□□ 0.51
SP110Q9HB58 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SP110Q9HB58 AC233702.3-201ENST00000578656 1387 ntBASIC18.23■□□□□ 0.51
SP110Q9HB58 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 MIR3180-1-201ENST00000580374 94 ntBASIC18.23■□□□□ 0.51
SP110Q9HB58 MIR3180-3-201ENST00000584616 94 ntBASIC18.23■□□□□ 0.51
SP110Q9HB58 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.23■□□□□ 0.51
SP110Q9HB58 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.23■□□□□ 0.51
SP110Q9HB58 AC092329.2-201ENST00000598402 547 ntBASIC18.23■□□□□ 0.51
SP110Q9HB58 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 AC009949.1-201ENST00000623048 1830 ntBASIC18.23■□□□□ 0.51
SP110Q9HB58 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SP110Q9HB58 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SP110Q9HB58 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SP110Q9HB58 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SP110Q9HB58 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.23■□□□□ 0.51
SP110Q9HB58 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.23■□□□□ 0.51
SP110Q9HB58 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP110Q9HB58 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.22■□□□□ 0.51
SP110Q9HB58 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.22■□□□□ 0.51
SP110Q9HB58 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 NOC2LP2-201ENST00000407594 1944 ntBASIC18.22■□□□□ 0.51
SP110Q9HB58 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SP110Q9HB58 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SP110Q9HB58 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SP110Q9HB58 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.22■□□□□ 0.51
SP110Q9HB58 AP000867.3-201ENST00000524675 377 ntBASIC18.22■□□□□ 0.51
SP110Q9HB58 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.22■□□□□ 0.51
SP110Q9HB58 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.22■□□□□ 0.51
SP110Q9HB58 AL353801.3-201ENST00000609898 542 ntBASIC18.22■□□□□ 0.51
SP110Q9HB58 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SP110Q9HB58 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SP110Q9HB58 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.22■□□□□ 0.51
SP110Q9HB58 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SP110Q9HB58 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP110Q9HB58 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SP110Q9HB58 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms