Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.31■□□□□ 0.52
BRD9Q9H8M2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 AC134684.3-201ENST00000641758 218 ntBASIC18.31■□□□□ 0.52
BRD9Q9H8M2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRD9Q9H8M2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 MTDHP5-201ENST00000598980 586 ntBASIC18.3■□□□□ 0.52
BRD9Q9H8M2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 AC132938.6-201ENST00000623828 1655 ntBASIC18.3■□□□□ 0.52
BRD9Q9H8M2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.3■□□□□ 0.52
BRD9Q9H8M2 AL020996.1-203ENST00000536896 2307 ntBASIC18.29■□□□□ 0.52
BRD9Q9H8M2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 AC004817.3-201ENST00000602957 2129 ntBASIC18.29■□□□□ 0.52
BRD9Q9H8M2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.29■□□□□ 0.52
BRD9Q9H8M2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms