Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 KRT16P4-201ENST00000453883 522 ntBASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 AC114341.1-201ENST00000618070 349 ntBASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATP13A3Q9H7F0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 TSPY19P-201ENST00000418461 509 ntBASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 TSPY18P-201ENST00000441642 509 ntBASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 KRT18P31-201ENST00000506277 1292 ntBASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 AC091304.2-201ENST00000564639 760 ntBASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 LINC01711-201ENST00000598340 967 ntBASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP13A3Q9H7F0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 AL450487.1-201ENST00000426799 995 ntBASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 AC007967.3-201ENST00000434308 558 ntBASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 KRT126P-201ENST00000549467 1181 ntBASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
ATP13A3Q9H7F0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms