Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 MRPL20P1-201ENST00000400819 433 ntBASIC19.34■□□□□ 0.69
HIPK3Q9H422 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 AC093028.1-201ENST00000622998 982 ntBASIC19.34■□□□□ 0.69
HIPK3Q9H422 AC010507.1-201ENST00000633895 436 ntBASIC19.34■□□□□ 0.69
HIPK3Q9H422 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIPK3Q9H422 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HIPK3Q9H422 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.33■□□□□ 0.69
HIPK3Q9H422 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HIPK3Q9H422 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HIPK3Q9H422 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIPK3Q9H422 BCAR1-209ENST00000546196 1340 ntBASIC19.33■□□□□ 0.69
HIPK3Q9H422 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIPK3Q9H422 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIPK3Q9H422 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 AL805961.1-202ENST00000641562 540 ntBASIC19.33■□□□□ 0.68
HIPK3Q9H422 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.33■□□□□ 0.68
HIPK3Q9H422 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIPK3Q9H422 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HIPK3Q9H422 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 AC003669.1-201ENST00000334569 611 ntBASIC19.32■□□□□ 0.68
HIPK3Q9H422 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 TSEN15P1-201ENST00000423257 515 ntBASIC19.32■□□□□ 0.68
HIPK3Q9H422 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 KRT19P2-202ENST00000557173 1012 ntBASIC19.32■□□□□ 0.68
HIPK3Q9H422 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 AC096734.2-201ENST00000562054 433 ntBASIC19.32■□□□□ 0.68
HIPK3Q9H422 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HIPK3Q9H422 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 AC093010.1-201ENST00000473625 1624 ntBASIC19.32■□□□□ 0.68
HIPK3Q9H422 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIPK3Q9H422 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 FAM58CP-201ENST00000435741 640 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms