Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 AC006116.8-202ENST00000587620 1550 ntBASIC16.49■□□□□ 0.23
UBQLN3Q9H347 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CLEC4GP1-201ENST00000596555 870 ntBASIC16.49■□□□□ 0.23
UBQLN3Q9H347 AL592071.1-201ENST00000611956 408 ntBASIC16.49■□□□□ 0.23
UBQLN3Q9H347 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN3Q9H347 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 DUSP5P1-201ENST00000441325 1139 ntBASIC16.48■□□□□ 0.23
UBQLN3Q9H347 GUSBP12-201ENST00000513727 720 ntBASIC16.48■□□□□ 0.23
UBQLN3Q9H347 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 IGHV3-41-201ENST00000613121 348 ntBASIC16.48■□□□□ 0.23
UBQLN3Q9H347 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.48■□□□□ 0.23
UBQLN3Q9H347 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 AC093010.1-201ENST00000473625 1624 ntBASIC16.48■□□□□ 0.23
UBQLN3Q9H347 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN3Q9H347 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms