Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 LINC00602-201ENST00000629776 2065 ntBASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR2J3Q9H1A7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.46■□□□□ 0.22
POLR2J3Q9H1A7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
POLR2J3Q9H1A7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
POLR2J3Q9H1A7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
POLR2J3Q9H1A7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 KRT8P9-201ENST00000558927 1449 ntBASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 ECEL1P2-202ENST00000465689 757 ntBASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 AC084018.2-201ENST00000613093 2607 ntBASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 KRT18P22-201ENST00000402024 1347 ntBASIC16.45■□□□□ 0.22
POLR2J3Q9H1A7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms