Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 AC139713.2-201ENST00000641328 2723 ntBASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 IER3-202ENST00000376377 1350 ntBASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 AP002383.4-201ENST00000442518 975 ntBASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 TSSC2-201ENST00000450217 709 ntBASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 AC141586.5-201ENST00000624546 2050 ntBASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.88■□□□□ 0.77
CCSER1Q9C0I3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 AC091607.1-201ENST00000490318 1060 ntBASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 AC091076.1-201ENST00000610741 619 ntBASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 AP000550.4-202ENST00000639755 178 ntBASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCSER1Q9C0I3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 DRAXINP1-201ENST00000437611 948 ntBASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 AP005901.3-202ENST00000581653 237 ntBASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCSER1Q9C0I3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms