Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 AC010240.3-201ENST00000607688 395 ntBASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.66■□□□□ 0.26
AMBRA1Q9C0C7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 AC113347.1-201ENST00000413321 391 ntBASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 SLC25A3P1-201ENST00000443844 931 ntBASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 AL590326.2-201ENST00000625139 305 ntBASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AMBRA1Q9C0C7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
AMBRA1Q9C0C7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 INGX-201ENST00000359239 846 ntBASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 RCN1P1-201ENST00000400413 996 ntBASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 AC005363.2-201ENST00000618631 242 ntBASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 AC106886.4-201ENST00000623557 2502 ntBASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.64■□□□□ 0.25
AMBRA1Q9C0C7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.63■□□□□ 0.25
AMBRA1Q9C0C7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms