Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ABHD17AP1-201ENST00000358206 933 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 KRT18P29-201ENST00000397031 1267 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC25A1P2-201ENST00000430693 912 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 SEC1P-202ENST00000473944 940 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 KATNBL1P4-201ENST00000503545 918 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 KRT8P2-201ENST00000556193 944 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 AC113410.3-201ENST00000623366 203 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 AC008894.3-201ENST00000624324 3103 ntBASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP3-1Q9BYR8 RHBDF1P1-201ENST00000427504 1941 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms