Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 BX276092.7-203ENST00000637198 1536 ntBASIC21.04■□□□□ 0.96
NEK1Q96PY6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 HLA-J-201ENST00000462773 1622 ntBASIC21.04■□□□□ 0.96
NEK1Q96PY6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 AC090340.1-201ENST00000620778 4980 ntBASIC21.04■□□□□ 0.96
NEK1Q96PY6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK1Q96PY6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.04■□□□□ 0.96
NEK1Q96PY6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.03■□□□□ 0.96
NEK1Q96PY6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NEK1Q96PY6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK1Q96PY6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 CHCHD2P8-201ENST00000429873 447 ntBASIC21.02■□□□□ 0.96
NEK1Q96PY6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK1Q96PY6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK1Q96PY6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
NEK1Q96PY6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.02■□□□□ 0.95
NEK1Q96PY6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NEK1Q96PY6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NEK1Q96PY6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NEK1Q96PY6 AC010460.3-201ENST00000511359 1579 ntBASIC21.02■□□□□ 0.95
NEK1Q96PY6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 IER3-202ENST00000376377 1350 ntBASIC21.01■□□□□ 0.95
NEK1Q96PY6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms