Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 AC018845.2-201ENST00000568326 409 ntBASIC18.88■□□□□ 0.61
CASD1Q96PB1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 AC002310.6-201ENST00000624451 1377 ntBASIC18.88■□□□□ 0.61
CASD1Q96PB1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASD1Q96PB1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASD1Q96PB1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASD1Q96PB1 AC120498.9-201ENST00000339021 3867 ntBASIC18.87■□□□□ 0.61
CASD1Q96PB1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASD1Q96PB1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASD1Q96PB1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 AC211486.1-202ENST00000416371 468 ntBASIC18.87■□□□□ 0.61
CASD1Q96PB1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 AC211476.1-201ENST00000503899 468 ntBASIC18.87■□□□□ 0.61
CASD1Q96PB1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASD1Q96PB1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CASD1Q96PB1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 AC009336.1-201ENST00000608941 1553 ntBASIC18.86■□□□□ 0.61
CASD1Q96PB1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 IGHV3-52-201ENST00000519770 353 ntBASIC18.86■□□□□ 0.61
CASD1Q96PB1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 AC005829.1-201ENST00000570002 483 ntBASIC18.86■□□□□ 0.61
CASD1Q96PB1 AL805961.1-202ENST00000641562 540 ntBASIC18.86■□□□□ 0.61
CASD1Q96PB1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 AC097637.2-201ENST00000624096 1997 ntBASIC18.86■□□□□ 0.61
CASD1Q96PB1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASD1Q96PB1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CASD1Q96PB1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 AP006288.1-201ENST00000446065 395 ntBASIC18.85■□□□□ 0.61
CASD1Q96PB1 YBX1P5-201ENST00000509441 847 ntBASIC18.85■□□□□ 0.61
CASD1Q96PB1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 AL513190.1-201ENST00000621254 727 ntBASIC18.85■□□□□ 0.61
CASD1Q96PB1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CASD1Q96PB1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASD1Q96PB1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms