Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 HCG4B-203ENST00000450128 991 ntBASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AC018845.2-201ENST00000568326 409 ntBASIC18.8■□□□□ 0.6
ZNF558Q96NG5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AL596442.2-201ENST00000610240 980 ntBASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AC004790.2-201ENST00000623588 572 ntBASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AC092865.6-201ENST00000642101 219 ntBASIC18.8■□□□□ 0.6
ZNF558Q96NG5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF558Q96NG5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 BX276092.7-203ENST00000637198 1536 ntBASIC18.79■□□□□ 0.6
ZNF558Q96NG5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 YBX1P5-201ENST00000509441 847 ntBASIC18.79■□□□□ 0.6
ZNF558Q96NG5 STK19B-204ENST00000512515 211 ntBASIC18.79■□□□□ 0.6
ZNF558Q96NG5 IGHV3-52-201ENST00000519770 353 ntBASIC18.79■□□□□ 0.6
ZNF558Q96NG5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF558Q96NG5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 ALG1L5P-201ENST00000482043 771 ntBASIC18.78■□□□□ 0.6
ZNF558Q96NG5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 STK25P1-201ENST00000585406 838 ntBASIC18.78■□□□□ 0.6
ZNF558Q96NG5 AL805961.1-202ENST00000641562 540 ntBASIC18.78■□□□□ 0.6
ZNF558Q96NG5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms