Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 SIGLEC30P-201ENST00000455569 941 ntBASIC20.68■□□□□ 0.9
CCDC17Q96LX7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 STK25P1-201ENST00000585406 838 ntBASIC20.68■□□□□ 0.9
CCDC17Q96LX7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 AC104581.1-202ENST00000635932 2618 ntBASIC20.68■□□□□ 0.9
CCDC17Q96LX7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC17Q96LX7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 KRT18P27-201ENST00000427733 1299 ntBASIC20.67■□□□□ 0.9
CCDC17Q96LX7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC17Q96LX7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 MYCLP1-201ENST00000372451 1075 ntBASIC20.66■□□□□ 0.9
CCDC17Q96LX7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.66■□□□□ 0.9
CCDC17Q96LX7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 PGM5P2-202ENST00000637225 1043 ntBASIC20.66■□□□□ 0.9
CCDC17Q96LX7 ABALON-201ENST00000629058 1903 ntBASIC20.66■□□□□ 0.9
CCDC17Q96LX7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC17Q96LX7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 BICD1-207ENST00000551848 1962 ntBASIC20.65■□□□□ 0.9
CCDC17Q96LX7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 AP002414.3-201ENST00000589352 1468 ntBASIC20.65■□□□□ 0.9
CCDC17Q96LX7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 AC005104.2-201ENST00000427818 678 ntBASIC20.65■□□□□ 0.9
CCDC17Q96LX7 RNA5SP415-201ENST00000517246 115 ntBASIC20.65■□□□□ 0.9
CCDC17Q96LX7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 AC023511.2-201ENST00000618803 211 ntBASIC20.65■□□□□ 0.9
CCDC17Q96LX7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC17Q96LX7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC17Q96LX7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC17Q96LX7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms