Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 AC063952.2-201ENST00000498792 1227 ntBASIC18.33■□□□□ 0.52
C9orf72Q96LT7 DUTP2-201ENST00000519164 463 ntBASIC18.33■□□□□ 0.52
C9orf72Q96LT7 AC022616.7-201ENST00000525383 220 ntBASIC18.33■□□□□ 0.52
C9orf72Q96LT7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 LINC01238-205ENST00000567549 1107 ntBASIC18.33■□□□□ 0.52
C9orf72Q96LT7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 AC112497.1-201ENST00000624824 639 ntBASIC18.33■□□□□ 0.52
C9orf72Q96LT7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 AC133963.1-201ENST00000504166 1679 ntBASIC18.32■□□□□ 0.52
C9orf72Q96LT7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 RNF152P1-201ENST00000397754 604 ntBASIC18.32■□□□□ 0.52
C9orf72Q96LT7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 YBX1P2-201ENST00000489612 999 ntBASIC18.32■□□□□ 0.52
C9orf72Q96LT7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 AC009065.1-201ENST00000564055 1225 ntBASIC18.32■□□□□ 0.52
C9orf72Q96LT7 AC087388.1-201ENST00000571370 1112 ntBASIC18.32■□□□□ 0.52
C9orf72Q96LT7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.32■□□□□ 0.52
C9orf72Q96LT7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
C9orf72Q96LT7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 AL138688.1-201ENST00000624851 1594 ntBASIC18.31■□□□□ 0.52
C9orf72Q96LT7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf72Q96LT7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms