Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNX27Q96L92 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SNX27Q96L92 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 HLA-A-201ENST00000376802 1334 ntBASIC19.15■□□□□ 0.66
SNX27Q96L92 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SNX27Q96L92 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 PMPCAP1-201ENST00000508114 1576 ntBASIC19.15■□□□□ 0.66
SNX27Q96L92 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
SNX27Q96L92 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNX27Q96L92 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SNX27Q96L92 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SNX27Q96L92 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNX27Q96L92 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SNX27Q96L92 SIRPAP1-201ENST00000448467 1770 ntBASIC19.14■□□□□ 0.66
SNX27Q96L92 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 AC103564.2-201ENST00000432853 1299 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 AC018712.1-201ENST00000455767 687 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.14■□□□□ 0.65
SNX27Q96L92 SCARNA2-201ENST00000458748 420 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.14■□□□□ 0.65
SNX27Q96L92 PGAM5P1-201ENST00000518923 814 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.14■□□□□ 0.65
SNX27Q96L92 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 AC148477.8-201ENST00000624298 468 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX27Q96L92 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX27Q96L92 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.14■□□□□ 0.65
SNX27Q96L92 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX27Q96L92 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX27Q96L92 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX27Q96L92 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX27Q96L92 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 RNA5SP419-201ENST00000515908 135 ntBASIC19.13■□□□□ 0.65
SNX27Q96L92 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX27Q96L92 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX27Q96L92 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX27Q96L92 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX27Q96L92 AL773604.1-201ENST00000617417 272 ntBASIC19.13■□□□□ 0.65
SNX27Q96L92 AL139288.1-201ENST00000623748 933 ntBASIC19.13■□□□□ 0.65
SNX27Q96L92 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX27Q96L92 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX27Q96L92 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX27Q96L92 BX276092.7-203ENST00000637198 1536 ntBASIC19.13■□□□□ 0.65
SNX27Q96L92 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX27Q96L92 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms