Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AC079781.3-201ENST00000449110 356 ntBASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AL355877.3-201ENST00000622820 899 ntBASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 AP005117.1-201ENST00000584346 1413 ntBASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 SLC25A6P5-201ENST00000435663 894 ntBASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCD1Q96GM5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 MTDHP3-201ENST00000594186 672 ntBASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD1Q96GM5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms