Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 AC016734.2-201ENST00000624325 1377 ntBASIC18.34■□□□□ 0.53
IFT43Q96FT9 AC011270.2-201ENST00000624293 2550 ntBASIC18.34■□□□□ 0.53
IFT43Q96FT9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 TPM4P1-201ENST00000436100 807 ntBASIC18.34■□□□□ 0.53
IFT43Q96FT9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 AC092329.2-201ENST00000598402 547 ntBASIC18.34■□□□□ 0.53
IFT43Q96FT9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.34■□□□□ 0.53
IFT43Q96FT9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IFT43Q96FT9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IFT43Q96FT9 PCDHA12-202ENST00000613593 2588 ntBASIC18.34■□□□□ 0.53
IFT43Q96FT9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.33■□□□□ 0.53
IFT43Q96FT9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 AC138028.4-201ENST00000564984 1845 ntBASIC18.33■□□□□ 0.53
IFT43Q96FT9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
IFT43Q96FT9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFT43Q96FT9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.33■□□□□ 0.53
IFT43Q96FT9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
IFT43Q96FT9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.33■□□□□ 0.53
IFT43Q96FT9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.33■□□□□ 0.52
IFT43Q96FT9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.33■□□□□ 0.52
IFT43Q96FT9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
IFT43Q96FT9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
IFT43Q96FT9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.33■□□□□ 0.52
IFT43Q96FT9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.33■□□□□ 0.52
IFT43Q96FT9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 KRT89P-201ENST00000620027 1478 ntBASIC18.33■□□□□ 0.52
IFT43Q96FT9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IFT43Q96FT9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 MIR3652-201ENST00000579335 131 ntBASIC18.32■□□□□ 0.52
IFT43Q96FT9 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms