Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 KRT18P48-201ENST00000434763 852 ntBASIC17.97■□□□□ 0.47
LRRC39Q96DD0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 AC145285.6-201ENST00000604632 637 ntBASIC17.97■□□□□ 0.47
LRRC39Q96DD0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 AC079602.3-201ENST00000623931 403 ntBASIC17.97■□□□□ 0.47
LRRC39Q96DD0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 HLA-F-220ENST00000434407 884 ntBASIC17.96■□□□□ 0.47
LRRC39Q96DD0 AC112698.1-201ENST00000510299 916 ntBASIC17.96■□□□□ 0.47
LRRC39Q96DD0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 AC140113.3-201ENST00000605663 199 ntBASIC17.96■□□□□ 0.47
LRRC39Q96DD0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC39Q96DD0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRRC39Q96DD0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 TSPY12P-201ENST00000421279 868 ntBASIC17.95■□□□□ 0.46
LRRC39Q96DD0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 AC004263.2-201ENST00000617183 678 ntBASIC17.95■□□□□ 0.46
LRRC39Q96DD0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.95■□□□□ 0.46
LRRC39Q96DD0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC39Q96DD0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 AL023973.1-201ENST00000624619 620 ntBASIC17.94■□□□□ 0.46
LRRC39Q96DD0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms