Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 AP003041.3-201ENST00000527151 707 ntBASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 AL023803.3-201ENST00000615559 522 ntBASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXRED1Q96CU9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 AC087499.1-201ENST00000418141 1075 ntBASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 CCR12P-201ENST00000446203 998 ntBASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 LINC01023-201ENST00000606054 436 ntBASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXRED1Q96CU9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXRED1Q96CU9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms