Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 KRT17P6-201ENST00000453795 1220 ntBASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 AC091304.2-201ENST00000564639 760 ntBASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 LINC01126-201ENST00000623515 1646 ntBASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 AC004870.1-201ENST00000315132 882 ntBASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 TSPY19P-201ENST00000418461 509 ntBASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 TSPY18P-201ENST00000441642 509 ntBASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.63■□□□□ 0.41
SH3KBP1Q96B97 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 FAAHP1-202ENST00000446499 1238 ntBASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH3KBP1Q96B97 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH3KBP1Q96B97 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
SH3KBP1Q96B97 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH3KBP1Q96B97 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.61■□□□□ 0.41
SH3KBP1Q96B97 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms