Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC3Q92529 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 PCED1CP-201ENST00000419887 785 ntBASIC18.95■□□□□ 0.62
SHC3Q92529 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 BX276092.5-203ENST00000456199 560 ntBASIC18.95■□□□□ 0.62
SHC3Q92529 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC3Q92529 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.95■□□□□ 0.62
SHC3Q92529 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.95■□□□□ 0.62
SHC3Q92529 AC087388.1-201ENST00000571370 1112 ntBASIC18.95■□□□□ 0.62
SHC3Q92529 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.95■□□□□ 0.62
SHC3Q92529 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC3Q92529 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHC3Q92529 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SHC3Q92529 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC3Q92529 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 AC108860.2-201ENST00000562760 2183 ntBASIC18.95■□□□□ 0.62
SHC3Q92529 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC3Q92529 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC3Q92529 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC3Q92529 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SHC3Q92529 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHC3Q92529 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 AC246785.2-201ENST00000432512 513 ntBASIC18.94■□□□□ 0.62
SHC3Q92529 AC007967.3-201ENST00000434308 558 ntBASIC18.94■□□□□ 0.62
SHC3Q92529 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SHC3Q92529 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.94■□□□□ 0.62
SHC3Q92529 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHC3Q92529 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC3Q92529 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SHC3Q92529 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC3Q92529 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.94■□□□□ 0.62
SHC3Q92529 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.94■□□□□ 0.62
SHC3Q92529 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC3Q92529 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SHC3Q92529 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC3Q92529 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.93■□□□□ 0.62
SHC3Q92529 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 AC011840.4-201ENST00000578471 627 ntBASIC18.93■□□□□ 0.62
SHC3Q92529 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC3Q92529 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SHC3Q92529 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.93■□□□□ 0.62
SHC3Q92529 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC3Q92529 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
SHC3Q92529 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC3Q92529 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC3Q92529 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 CROCCP2-202ENST00000412962 2773 ntBASIC18.92■□□□□ 0.62
SHC3Q92529 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms