Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 MCCD1P2-201ENST00000423228 335 ntBASIC30.33■■■□□ 2.45
TRIM41Q8WV44 MEG3-211ENST00000452514 461 ntTSL 3 BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 AC096582.2-201ENST00000510860 516 ntBASIC30.33■■■□□ 2.45
TRIM41Q8WV44 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM41Q8WV44 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
TRIM41Q8WV44 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 MRPL20P1-201ENST00000400819 433 ntBASIC30.32■■■□□ 2.44
TRIM41Q8WV44 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM41Q8WV44 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 UNC93B6-202ENST00000528242 690 ntBASIC30.31■■■□□ 2.44
TRIM41Q8WV44 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 MADD-208ENST00000405573 1823 ntTSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC30.31■■■□□ 2.44
TRIM41Q8WV44 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 PAN3-AS1-201ENST00000563843 1351 ntBASIC30.3■■■□□ 2.44
TRIM41Q8WV44 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 FLYWCH1P1-201ENST00000460917 1874 ntBASIC30.3■■■□□ 2.44
TRIM41Q8WV44 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 RCN1P2-201ENST00000398357 915 ntBASIC30.3■■■□□ 2.44
TRIM41Q8WV44 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 DUTP2-201ENST00000519164 463 ntBASIC30.3■■■□□ 2.44
TRIM41Q8WV44 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 PNMT-203ENST00000581428 677 ntTSL 2 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 AC114341.1-201ENST00000618070 349 ntBASIC30.3■■■□□ 2.44
TRIM41Q8WV44 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms