Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.51■□□□□ 0.23
CT55Q8WUE5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AC006504.4-201ENST00000592118 1568 ntBASIC16.51■□□□□ 0.23
CT55Q8WUE5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 AC135776.1-201ENST00000319817 2481 ntBASIC16.5■□□□□ 0.23
CT55Q8WUE5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 AC004832.2-201ENST00000426397 482 ntBASIC16.5■□□□□ 0.23
CT55Q8WUE5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 SIGLEC30P-201ENST00000455569 941 ntBASIC16.5■□□□□ 0.23
CT55Q8WUE5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 NCF1C-201ENST00000438382 1427 ntBASIC16.5■□□□□ 0.23
CT55Q8WUE5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CT55Q8WUE5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
CT55Q8WUE5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.49■□□□□ 0.23
CT55Q8WUE5 AC009949.1-201ENST00000623048 1830 ntBASIC16.49■□□□□ 0.23
CT55Q8WUE5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms