Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 PCDHA12-202ENST00000613593 2588 ntBASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSMEM1Q8N8F7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 KRT8P47-201ENST00000604727 1398 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 TSPY12P-201ENST00000421279 868 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 KRT18P38-201ENST00000449496 1282 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 AP003733.1-201ENST00000491725 852 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 ZNF444P1-201ENST00000559497 298 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 HYMAI.1-201ENST00000620949 238 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 AC009949.1-201ENST00000623048 1830 ntBASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSMEM1Q8N8F7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 KRT18P57-201ENST00000443599 1254 ntBASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms