Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 KRT16P4-201ENST00000453883 522 ntBASIC18.9■□□□□ 0.62
TTC39CQ8N584 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 AC099336.1-202ENST00000602961 463 ntBASIC18.9■□□□□ 0.62
TTC39CQ8N584 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TTC39CQ8N584 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TTC39CQ8N584 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.89■□□□□ 0.62
TTC39CQ8N584 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 AC096582.2-201ENST00000510860 516 ntBASIC18.89■□□□□ 0.61
TTC39CQ8N584 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 AL121772.3-201ENST00000610840 674 ntBASIC18.89■□□□□ 0.61
TTC39CQ8N584 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39CQ8N584 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39CQ8N584 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 MYCLP1-201ENST00000372451 1075 ntBASIC18.88■□□□□ 0.61
TTC39CQ8N584 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 INTS4P1-201ENST00000438455 1935 ntBASIC18.88■□□□□ 0.61
TTC39CQ8N584 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39CQ8N584 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39CQ8N584 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms