Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 AC105339.3-201ENST00000560043 636 ntBASIC18.84■□□□□ 0.61
RNF135Q8IUD6 SNHG9-202ENST00000564014 471 ntBASIC18.84■□□□□ 0.61
RNF135Q8IUD6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 AC025062.2-201ENST00000605477 670 ntBASIC18.84■□□□□ 0.61
RNF135Q8IUD6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 AL356309.3-201ENST00000624132 1934 ntBASIC18.84■□□□□ 0.61
RNF135Q8IUD6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF135Q8IUD6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF135Q8IUD6 WIZP1-201ENST00000531444 2299 ntBASIC18.83■□□□□ 0.61
RNF135Q8IUD6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 AL035633.1-201ENST00000406139 838 ntBASIC18.83■□□□□ 0.6
RNF135Q8IUD6 ABCD1P5-201ENST00000445663 754 ntBASIC18.83■□□□□ 0.6
RNF135Q8IUD6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
RNF135Q8IUD6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF135Q8IUD6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms