Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB11FIP4Q86YS3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11FIP4Q86YS3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 AL355312.1-201ENST00000407115 2176 ntBASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11FIP4Q86YS3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 AP000867.3-201ENST00000524675 377 ntBASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11FIP4Q86YS3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms