Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 LINC01311-201ENST00000565162 1445 ntBASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE8Q86YQ8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 LINC01023-201ENST00000606054 436 ntBASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CPNE8Q86YQ8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 Z83836.1-201ENST00000624605 1642 ntBASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 GPR32P1-201ENST00000601788 811 ntBASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE8Q86YQ8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 FAM8A6P-201ENST00000407496 1135 ntBASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 DDX43P3-201ENST00000441064 443 ntBASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 MTCL1P1-201ENST00000446207 792 ntBASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 AC063952.2-201ENST00000498792 1227 ntBASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPNE8Q86YQ8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE8Q86YQ8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms