Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 FAM185BP-201ENST00000443595 716 ntBASIC22.16■■□□□ 1.14
COL23A1Q86Y22 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 KRT8P48-201ENST00000515599 1220 ntBASIC22.16■■□□□ 1.14
COL23A1Q86Y22 AC112191.1-201ENST00000523689 701 ntBASIC22.16■■□□□ 1.14
COL23A1Q86Y22 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 STK25P1-201ENST00000585406 838 ntBASIC22.16■■□□□ 1.14
COL23A1Q86Y22 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 PI4KAP1-204ENST00000612579 1703 ntBASIC22.15■■□□□ 1.14
COL23A1Q86Y22 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 MEIS3P1-201ENST00000495167 958 ntBASIC22.15■■□□□ 1.14
COL23A1Q86Y22 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 AC026120.1-201ENST00000611536 926 ntBASIC22.15■■□□□ 1.14
COL23A1Q86Y22 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL23A1Q86Y22 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL23A1Q86Y22 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
COL23A1Q86Y22 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 STK19B-204ENST00000512515 211 ntBASIC22.14■■□□□ 1.13
COL23A1Q86Y22 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.14■■□□□ 1.13
COL23A1Q86Y22 AC093010.1-201ENST00000473625 1624 ntBASIC22.13■■□□□ 1.13
COL23A1Q86Y22 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 MIR943-201ENST00000401286 94 ntBASIC22.13■■□□□ 1.13
COL23A1Q86Y22 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 DUX4L17-201ENST00000557360 1267 ntBASIC22.13■■□□□ 1.13
COL23A1Q86Y22 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL23A1Q86Y22 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms