Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 MIR940-201ENST00000401276 94 ntBASIC19.79■□□□□ 0.76
TRIM50Q86XT4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 AC122714.2-201ENST00000502787 707 ntBASIC19.79■□□□□ 0.76
TRIM50Q86XT4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 HLA-J-201ENST00000462773 1622 ntBASIC19.79■□□□□ 0.76
TRIM50Q86XT4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 AC079776.2-201ENST00000641154 1609 ntBASIC19.79■□□□□ 0.76
TRIM50Q86XT4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 AC098831.1-202ENST00000438821 336 ntBASIC19.78■□□□□ 0.76
TRIM50Q86XT4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 IGHV3-22-201ENST00000520721 359 ntBASIC19.78■□□□□ 0.76
TRIM50Q86XT4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 AD001527.2-201ENST00000622994 785 ntBASIC19.78■□□□□ 0.76
TRIM50Q86XT4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM50Q86XT4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 AC104109.2-201ENST00000602919 1418 ntBASIC19.77■□□□□ 0.76
TRIM50Q86XT4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 RPS2P28-201ENST00000314255 741 ntBASIC19.77■□□□□ 0.76
TRIM50Q86XT4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 KRT18P58-201ENST00000527480 1120 ntBASIC19.77■□□□□ 0.76
TRIM50Q86XT4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 AC008735.5-201ENST00000623544 497 ntBASIC19.77■□□□□ 0.76
TRIM50Q86XT4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 AP002414.3-201ENST00000589352 1468 ntBASIC19.77■□□□□ 0.76
TRIM50Q86XT4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM50Q86XT4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM50Q86XT4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM50Q86XT4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM50Q86XT4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM50Q86XT4 AP000997.3-201ENST00000623333 2250 ntBASIC19.77■□□□□ 0.75
TRIM50Q86XT4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 AC009113.1-201ENST00000570267 2443 ntBASIC19.76■□□□□ 0.75
TRIM50Q86XT4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 COX5BP2-201ENST00000392354 334 ntBASIC19.76■□□□□ 0.75
TRIM50Q86XT4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 AC107918.4-202ENST00000641623 219 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms