Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXR1Q6PIV2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 AC132872.4-202ENST00000622924 2756 ntBASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 RNF152P1-201ENST00000397754 604 ntBASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 AC006116.8-202ENST00000587620 1550 ntBASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXR1Q6PIV2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXR1Q6PIV2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXR1Q6PIV2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 YBX1P2-201ENST00000489612 999 ntBASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXR1Q6PIV2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms