Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC073592.3-201ENST00000625118 1834 ntBASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 AL139400.1-201ENST00000366220 510 ntBASIC19■□□□□ 0.63
CNKSR3Q6P9H4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 AC004835.2-201ENST00000603762 682 ntBASIC19■□□□□ 0.63
CNKSR3Q6P9H4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CNKSR3Q6P9H4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 DDX43P3-201ENST00000441064 443 ntBASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 SPCS2P1-201ENST00000561636 679 ntBASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 AL513210.1-201ENST00000629608 234 ntBASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.99■□□□□ 0.63
CNKSR3Q6P9H4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 AC004449.1-201ENST00000564240 433 ntBASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms