Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 KRT18P41-201ENST00000518924 1277 ntBASIC13.47□□□□□ -0.25
MRPL54Q6P161 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 AL512625.2-201ENST00000417533 625 ntBASIC13.46□□□□□ -0.25
MRPL54Q6P161 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.46□□□□□ -0.25
MRPL54Q6P161 AC137761.2-201ENST00000561729 223 ntBASIC13.46□□□□□ -0.25
MRPL54Q6P161 AC145350.3-201ENST00000569033 163 ntBASIC13.46□□□□□ -0.25
MRPL54Q6P161 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 AC011767.1-201ENST00000617410 1153 ntBASIC13.46□□□□□ -0.25
MRPL54Q6P161 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL54Q6P161 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL54Q6P161 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.46□□□□□ -0.26
MRPL54Q6P161 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
MRPL54Q6P161 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
MRPL54Q6P161 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL54Q6P161 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms