Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 AP000867.3-201ENST00000524675 377 ntBASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 AC009949.1-201ENST00000623048 1830 ntBASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 NSUN5P1-202ENST00000421140 1535 ntBASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 NSUN5P2-203ENST00000457352 1529 ntBASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP4R3AQ6IN85 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PPP4R3AQ6IN85 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC005332.8-201ENST00000622750 2735 ntBASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC104819.1-201ENST00000504587 486 ntBASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC009533.2-201ENST00000543664 586 ntBASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC074051.2-201ENST00000565115 352 ntBASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP4R3AQ6IN85 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms