Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.58■□□□□ 0.08
FAM27BQ5VT28 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AC026471.1-201ENST00000564629 3026 ntBASIC15.57■□□□□ 0.08
FAM27BQ5VT28 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AL845331.1-201ENST00000424978 1190 ntBASIC15.57■□□□□ 0.08
FAM27BQ5VT28 TSSC2-201ENST00000450217 709 ntBASIC15.57■□□□□ 0.08
FAM27BQ5VT28 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AC010331.1-201ENST00000611423 582 ntBASIC15.57■□□□□ 0.08
FAM27BQ5VT28 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 AC125634.1-201ENST00000438758 1403 ntBASIC15.57■□□□□ 0.08
FAM27BQ5VT28 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.57■□□□□ 0.08
FAM27BQ5VT28 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 COX5BP2-201ENST00000392354 334 ntBASIC15.56■□□□□ 0.08
FAM27BQ5VT28 MIR1224-201ENST00000408193 85 ntBASIC15.56■□□□□ 0.08
FAM27BQ5VT28 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 AL445228.2-201ENST00000605589 952 ntBASIC15.56■□□□□ 0.08
FAM27BQ5VT28 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FAM27BQ5VT28 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ARMC10P1-201ENST00000313754 855 ntBASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 AC005104.2-201ENST00000427818 678 ntBASIC15.55■□□□□ 0.08
FAM27BQ5VT28 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 VENTXP7-201ENST00000475503 772 ntBASIC15.55■□□□□ 0.08
FAM27BQ5VT28 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FAM27BQ5VT28 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms