Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 AC104109.2-201ENST00000602919 1418 ntBASIC18.78■□□□□ 0.6
VARS2Q5ST30 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 POLD2P1-201ENST00000511220 997 ntBASIC18.78■□□□□ 0.6
VARS2Q5ST30 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 AC145285.3-201ENST00000564603 959 ntBASIC18.78■□□□□ 0.6
VARS2Q5ST30 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARS2Q5ST30 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VARS2Q5ST30 AP002414.3-201ENST00000589352 1468 ntBASIC18.77■□□□□ 0.6
VARS2Q5ST30 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 PRYP5-201ENST00000451909 266 ntBASIC18.77■□□□□ 0.6
VARS2Q5ST30 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARS2Q5ST30 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.77■□□□□ 0.6
VARS2Q5ST30 AC104581.1-202ENST00000635932 2618 ntBASIC18.77■□□□□ 0.6
VARS2Q5ST30 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VARS2Q5ST30 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VARS2Q5ST30 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VARS2Q5ST30 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VARS2Q5ST30 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
VARS2Q5ST30 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VARS2Q5ST30 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VARS2Q5ST30 AC132938.5-201ENST00000624980 1813 ntBASIC18.77■□□□□ 0.59
VARS2Q5ST30 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 MIR940-201ENST00000401276 94 ntBASIC18.76■□□□□ 0.59
VARS2Q5ST30 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 MTND2P7-201ENST00000521337 640 ntBASIC18.76■□□□□ 0.59
VARS2Q5ST30 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.76■□□□□ 0.59
VARS2Q5ST30 AC019129.2-201ENST00000609837 1235 ntBASIC18.76■□□□□ 0.59
VARS2Q5ST30 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.76■□□□□ 0.59
VARS2Q5ST30 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms