Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MS4A13Q5J8X5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.29■□□□□ 0.52
MS4A13Q5J8X5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MS4A13Q5J8X5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 AC012317.2-201ENST00000623305 2251 ntBASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 AP001269.4-201ENST00000609611 512 ntBASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 AC006116.8-202ENST00000587620 1550 ntBASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A13Q5J8X5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 ABCD1P5-201ENST00000445663 754 ntBASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 AC106795.1-205ENST00000512851 1056 ntBASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 AC104692.2-201ENST00000603054 253 ntBASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 AL121912.1-201ENST00000603683 238 ntBASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A13Q5J8X5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A13Q5J8X5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.27■□□□□ 0.51
MS4A13Q5J8X5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A13Q5J8X5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
MS4A13Q5J8X5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.27■□□□□ 0.51
MS4A13Q5J8X5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A13Q5J8X5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A13Q5J8X5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms