Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 PVRIG2P-201ENST00000435460 978 ntBASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AP000347.1-202ENST00000435868 847 ntBASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 BX276092.5-203ENST00000456199 560 ntBASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AC006538.3-201ENST00000612495 578 ntBASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 KRT8P3-201ENST00000519669 1449 ntBASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 TSSC2-201ENST00000450217 709 ntBASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 AL121672.3-201ENST00000608644 468 ntBASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 AC023511.2-201ENST00000618803 211 ntBASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 PKD1P5-201ENST00000532415 10291 ntBASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRFAM7AQ494W8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 SPDYE15P-201ENST00000424157 909 ntBASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 AC034232.1-201ENST00000506026 1064 ntBASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 KRT8P11-201ENST00000409686 1436 ntBASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRFAM7AQ494W8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms