Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 AC136632.2-201ENST00000512891 861 ntBASIC21.24■□□□□ 0.99
PDS5AQ29RF7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDS5AQ29RF7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 AC104109.2-201ENST00000602919 1418 ntBASIC21.23■□□□□ 0.99
PDS5AQ29RF7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 STK19B-204ENST00000512515 211 ntBASIC21.23■□□□□ 0.99
PDS5AQ29RF7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDS5AQ29RF7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 SLC25A6P5-201ENST00000435663 894 ntBASIC21.22■□□□□ 0.99
PDS5AQ29RF7 UNC93B6-202ENST00000528242 690 ntBASIC21.22■□□□□ 0.99
PDS5AQ29RF7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 FAM197Y3-203ENST00000618346 717 ntBASIC21.22■□□□□ 0.99
PDS5AQ29RF7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDS5AQ29RF7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 AC104581.1-202ENST00000635932 2618 ntBASIC21.21■□□□□ 0.99
PDS5AQ29RF7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms