Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP1P78357 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP1P78357 ELK2BP-201ENST00000415014 1224 ntBASIC21.04■□□□□ 0.96
CNTNAP1P78357 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP1P78357 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.04■□□□□ 0.96
CNTNAP1P78357 RN7SL204P-201ENST00000582831 262 ntBASIC21.04■□□□□ 0.96
CNTNAP1P78357 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP1P78357 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP1P78357 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP1P78357 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 AC132938.5-201ENST00000624980 1813 ntBASIC21.03■□□□□ 0.96
CNTNAP1P78357 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 MIR661-201ENST00000384842 89 ntBASIC21.03■□□□□ 0.96
CNTNAP1P78357 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 AC103564.2-201ENST00000432853 1299 ntBASIC21.03■□□□□ 0.96
CNTNAP1P78357 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 AC105339.1-204ENST00000636249 355 ntBASIC21.03■□□□□ 0.96
CNTNAP1P78357 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP1P78357 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP1P78357 AL049757.1-201ENST00000616842 1596 ntBASIC21.03■□□□□ 0.96
CNTNAP1P78357 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 IGLL3P-201ENST00000412472 434 ntBASIC21.02■□□□□ 0.96
CNTNAP1P78357 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 AL589182.2-201ENST00000619332 1049 ntBASIC21.02■□□□□ 0.96
CNTNAP1P78357 AC004706.3-202ENST00000621574 984 ntBASIC21.02■□□□□ 0.96
CNTNAP1P78357 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP1P78357 AC006504.4-201ENST00000592118 1568 ntBASIC21.02■□□□□ 0.96
CNTNAP1P78357 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.02■□□□□ 0.96
CNTNAP1P78357 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CNTNAP1P78357 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CNTNAP1P78357 AC073592.3-201ENST00000625118 1834 ntBASIC21.02■□□□□ 0.95
CNTNAP1P78357 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.02■□□□□ 0.95
CNTNAP1P78357 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP1P78357 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 AC067863.1-201ENST00000494933 530 ntBASIC21.01■□□□□ 0.95
CNTNAP1P78357 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.01■□□□□ 0.95
CNTNAP1P78357 DUX4L27-201ENST00000554796 1261 ntBASIC21.01■□□□□ 0.95
CNTNAP1P78357 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 AC004877.2-201ENST00000623941 599 ntBASIC21.01■□□□□ 0.95
CNTNAP1P78357 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP1P78357 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP1P78357 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21■□□□□ 0.95
CNTNAP1P78357 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP1P78357 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms