Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113P62684 AC010460.3-201ENST00000511359 1579 ntBASIC20.57■□□□□ 0.88
HERVK_113P62684 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.57■□□□□ 0.88
HERVK_113P62684 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.57■□□□□ 0.88
HERVK_113P62684 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113P62684 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.57■□□□□ 0.88
HERVK_113P62684 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.57■□□□□ 0.88
HERVK_113P62684 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113P62684 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.57■□□□□ 0.88
HERVK_113P62684 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113P62684 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113P62684 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.56■□□□□ 0.88
HERVK_113P62684 ESPNP-201ENST00000270691 2015 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.56■□□□□ 0.88
HERVK_113P62684 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113P62684 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113P62684 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HERVK_113P62684 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HERVK_113P62684 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113P62684 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.56■□□□□ 0.88
HERVK_113P62684 KRT18P27-201ENST00000427733 1299 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113P62684 DNAJB3-201ENST00000446806 729 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 AC122714.2-201ENST00000502787 707 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.56■□□□□ 0.88
HERVK_113P62684 MIR3687-2-201ENST00000577708 61 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 MIR3687-1-201ENST00000614492 61 ntBASIC20.56■□□□□ 0.88
HERVK_113P62684 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113P62684 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HERVK_113P62684 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113P62684 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.55■□□□□ 0.88
HERVK_113P62684 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.55■□□□□ 0.88
HERVK_113P62684 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HERVK_113P62684 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.55■□□□□ 0.88
HERVK_113P62684 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HERVK_113P62684 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.55■□□□□ 0.88
HERVK_113P62684 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.55■□□□□ 0.88
HERVK_113P62684 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 AP001160.2-201ENST00000596071 487 ntBASIC20.55■□□□□ 0.88
HERVK_113P62684 AC004817.3-201ENST00000602957 2129 ntBASIC20.55■□□□□ 0.88
HERVK_113P62684 AD001527.2-201ENST00000622994 785 ntBASIC20.55■□□□□ 0.88
HERVK_113P62684 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
HERVK_113P62684 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113P62684 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HERVK_113P62684 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HERVK_113P62684 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.54■□□□□ 0.88
HERVK_113P62684 AC004832.2-201ENST00000426397 482 ntBASIC20.54■□□□□ 0.88
HERVK_113P62684 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.54■□□□□ 0.88
HERVK_113P62684 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.54■□□□□ 0.88
HERVK_113P62684 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.54■□□□□ 0.88
HERVK_113P62684 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113P62684 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113P62684 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms