Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
USP46P62068 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 AC022898.2-201ENST00000616822 1312 ntBASIC18.69■□□□□ 0.58
USP46P62068 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP46P62068 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.68■□□□□ 0.58
USP46P62068 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP46P62068 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.68■□□□□ 0.58
USP46P62068 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.68■□□□□ 0.58
USP46P62068 FAM197Y8-203ENST00000450145 560 ntBASIC18.68■□□□□ 0.58
USP46P62068 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP46P62068 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.68■□□□□ 0.58
USP46P62068 MTDHP3-201ENST00000594186 672 ntBASIC18.68■□□□□ 0.58
USP46P62068 AC148477.8-201ENST00000624298 468 ntBASIC18.68■□□□□ 0.58
USP46P62068 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
USP46P62068 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
USP46P62068 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.68■□□□□ 0.58
USP46P62068 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.68■□□□□ 0.58
USP46P62068 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USP46P62068 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP46P62068 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.67■□□□□ 0.58
USP46P62068 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.67■□□□□ 0.58
USP46P62068 AP005117.1-201ENST00000584346 1413 ntBASIC18.67■□□□□ 0.58
USP46P62068 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.67■□□□□ 0.58
USP46P62068 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.67■□□□□ 0.58
USP46P62068 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.67■□□□□ 0.58
USP46P62068 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 ABCD1P5-201ENST00000445663 754 ntBASIC18.67■□□□□ 0.58
USP46P62068 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
USP46P62068 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP46P62068 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
USP46P62068 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.67■□□□□ 0.58
USP46P62068 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.67■□□□□ 0.58
USP46P62068 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP46P62068 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP46P62068 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP46P62068 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
USP46P62068 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.66■□□□□ 0.58
USP46P62068 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.66■□□□□ 0.58
USP46P62068 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 FAM220CP-201ENST00000395253 831 ntBASIC18.66■□□□□ 0.58
USP46P62068 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 RNA5SP419-201ENST00000515908 135 ntBASIC18.66■□□□□ 0.58
USP46P62068 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP46P62068 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.66■□□□□ 0.58
USP46P62068 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP46P62068 HLA-A-201ENST00000376802 1334 ntBASIC18.66■□□□□ 0.58
USP46P62068 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.66■□□□□ 0.58
USP46P62068 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms