Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
UBE2NP61088 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.65■□□□□ 0.1
UBE2NP61088 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.65■□□□□ 0.1
UBE2NP61088 AC099336.1-202ENST00000602961 463 ntBASIC15.65■□□□□ 0.1
UBE2NP61088 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBE2NP61088 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.64■□□□□ 0.09
UBE2NP61088 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.64■□□□□ 0.09
UBE2NP61088 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.64■□□□□ 0.09
UBE2NP61088 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
UBE2NP61088 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 AC020916.1-201ENST00000587762 1774 ntBASIC15.64■□□□□ 0.09
UBE2NP61088 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
UBE2NP61088 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2NP61088 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UBE2NP61088 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 NSUN5P1-202ENST00000421140 1535 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 NSUN5P2-203ENST00000457352 1529 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 AC135050.7-201ENST00000624508 2218 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.63■□□□□ 0.09
UBE2NP61088 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.63■□□□□ 0.09
UBE2NP61088 NUS1P1-201ENST00000446295 882 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.63■□□□□ 0.09
UBE2NP61088 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.63■□□□□ 0.09
UBE2NP61088 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.63■□□□□ 0.09
UBE2NP61088 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.63■□□□□ 0.09
UBE2NP61088 CLEC4GP1-201ENST00000596555 870 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 LINC01711-201ENST00000598340 967 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 AL353801.3-201ENST00000609898 542 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 AC138028.4-201ENST00000564984 1845 ntBASIC15.63■□□□□ 0.09
UBE2NP61088 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.63■□□□□ 0.09
UBE2NP61088 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UBE2NP61088 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBE2NP61088 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms